Index

A

addbiplot() (in module dokdo.api.addbiplot) addpairs() (in module dokdo.api.addpairs) addsig() (in module dokdo.api.addsig)

alpha_diversity_plot() (in module dokdo.api.alpha_diversity_plot) alpha_rarefaction_plot() (in module dokdo.api.alpha_rarefaction_plot) ancom_volcano_plot() (in module dokdo.api.ancom_volcano_plot)

B

beta_2d_plot() (in module dokdo.api.beta_2d_plot) beta_3d_plot() (in module dokdo.api.beta_3d_plot)

beta_parallel_plot() (in module dokdo.api.beta_parallel_plot) beta_scree_plot() (in module dokdo.api.beta_scree_plot)

C

clustermap() (in module dokdo.api.clustermap) cross_association_heatmap() (in module dokdo.api.cross_association)

cross_association_regplot() (in module dokdo.api.cross_association) cross_association_table() (in module dokdo.api.cross_association)

D

denoising_stats_plot() (in module dokdo.api.denoising_stats_plot) distance_matrix_plot() (in module dokdo.api.distance_matrix_plot) dokdo.api.addbiplot module dokdo.api.addpairs module dokdo.api.addsig module dokdo.api.alpha_diversity_plot module dokdo.api.alpha_rarefaction_plot module dokdo.api.ancom_volcano_plot module dokdo.api.beta_2d_plot module dokdo.api.beta_3d_plot module dokdo.api.beta_parallel_plot module

dokdo.api.beta_scree_plot module dokdo.api.denoising_stats_plot module dokdo.api.distance_matrix_plot module dokdo.api.mannwhitneyu module dokdo.api.num2sig module dokdo.api.ordinate module dokdo.api.read_quality_plot module dokdo.api.regplot module dokdo.api.wilcoxon module

G

get_mf() (in module dokdo.api.common)

group_correlation_heatmap() (in module dokdo.api.cross_association)

H

heatmap() (in module dokdo.api.clustermap)

M

mannwhitneyu() (in module dokdo.api.mannwhitneyu) module dokdo.api.addbiplot dokdo.api.addpairs dokdo.api.addsig dokdo.api.alpha_diversity_plot dokdo.api.alpha_rarefaction_plot dokdo.api.ancom_volcano_plot dokdo.api.beta_2d_plot dokdo.api.beta_3d_plot dokdo.api.beta_parallel_plot dokdo.api.beta_scree_plot dokdo.api.denoising_stats_plot dokdo.api.distance_matrix_plot dokdo.api.mannwhitneyu dokdo.api.num2sig dokdo.api.ordinate dokdo.api.read_quality_plot dokdo.api.regplot dokdo.api.wilcoxon

N

num2sig() (in module dokdo.api.num2sig)

O

ordinate() (in module dokdo.api.ordinate)

P

pname() (in module dokdo.api.common)

R

read_quality_plot() (in module dokdo.api.read_quality_plot)

regplot() (in module dokdo.api.regplot)

T

taxa_abundance_bar_plot() (in module dokdo.api.taxa_abundance)

taxa_abundance_box_plot() (in module dokdo.api.taxa_abundance)

W

wilcoxon() (in module dokdo.api.wilcoxon)