Welcome to dokdo’s documentation!
- README
- Dokdo CLI
- Dokdo API
- QIIME 2 CLI
- Introduction
- Removal of Adapters and Primers
- Import Sequences to QIIME 2
- Identify ASVs
- Merge Multiple Sequencing Runs
- Alpha Rarefaction
- Beta Rarefaction
- Compute Core Metrics
- Alpha Diversity Significance
- Beta Diversity Significance
- Build Phylogenetic Tree
- Filtering Data
- Taxonomy Classifier
- Classify Taxonomy
- Create Taxonomy Barplot
- Differential Abundance
- Taxonomy to Sequence
- Exporting Artifacts
- Biplot
- QIIME 2 API
- Useful Information
- Pipeline
- Changelog
- 1.16.0 (2022-12-27)
- 1.15.0 (2022-08-23)
- 1.14.0 (2022-06-24)
- 1.13.0 (2022-04-02)
- 1.12.0 (2022-02-11)
- 1.11.0 (2021-08-04)
- 1.10.0 (2021-07-06)
- 1.9.0 (2021-06-07)
- 1.8.0 (2021-05-09)
- 1.7.0 (2021-04-05)
- 1.6.0 (2021-03-08)
- 1.5.0 (2021-02-03)
- 1.4.0 (2021-01-09)
- 1.3.0 (2020-12-23)
- 1.2.0 (2020-12-08)
- 1.1.0 (2020-11-23)
- 1.0.0 (2020-11-09)